BT/Industriele Microbiologie

Search results

• Dataset metabolomics: Measurements of extracellular sugars and intracellular central carbon metabolites in Saccharomyces cerevisiae under steady-state chemostat and feast/famine regimes with different sugar substrates

  Verhagen, K. (Creator), Wahl, S. A. (Creator), Pardijs, I. H. (Creator) & van Klaveren, H. M. (Creator), TU Delft - 4TU.ResearchData, 28 Feb 2023

  DOI: 10.4121/21692057

  Dataset/Software: Dataset

• Data underlying the study on Improving CRISPR-Cas9 mediated genome integration in interspecific hybrid yeasts

  Daran, J. G. (Creator) & Bennis, N. X. (Creator), TU Delft - 4TU.ResearchData, 3 Mar 2023

  DOI: 10.4121/21648329

  Dataset/Software: Dataset

• Data underlying chapter 5 of PhD thesis: Exploring the potential of yeast mitochondria for synthetic cell research

  Daran-Lapujade, P. A. S. (Creator) & Koster, C. C. (Creator), TU Delft - 4TU.ResearchData, 10 Jul 2023

  DOI: 10.4121/12375721-959A-4452-A8CB-DC44277BFE86

  Dataset/Software: Dataset

• Data underlying the study on Engineering Saccharomyces cerevisiae for fast vitamin-independent aerobic growth

  Daran, J. G. (Creator), Wronska, A. K. (Creator), Perli, T. (Creator) & van den Broek, M. A. (Creator), TU Delft - 4TU.ResearchData, 27 Sept 2023

  DOI: 10.4121/4F77D092-450D-4354-AC61-50241F2C7E95

  Dataset/Software: Dataset

• Data underlying the research of Evolutionary and reverse engineering of single vitamin requirement in Saccharomyces cerevisiae.

  Daran, J. G. (Creator) & Perli, T. (Creator), TU Delft - 4TU.ResearchData, 13 Feb 2020

  DOI: 10.4121/UUID:53C9992F-D004-4D26-A3CD-789C524FE35C

  Dataset/Software: Dataset

• Data underlying the research on Identification of oxygen-independent pathways for pyridine-nucleotide and Coenzyme-A synthesis in anaerobic fungi by expression of candidate genes in yeast.

  Daran, J. G. (Creator), Perli, T. (Creator), Vos, A. M. (Creator), Ortiz Merino, R. A. (Creator), Pronk, J. T. (Creator), Bouwknegt, J. (Contributor), Dekker, W. J. C. (Contributor) & Wiersma, S. J. (Contributor), TU Delft - 4TU.ResearchData, 2 Jul 2020

  DOI: 10.4121/UUID:C3D2326D-9DDB-469A-B889-D05A09BE7D97

  Dataset/Software: Dataset

• Data underlying the research on Improving industrially relevant phenotypic traits by engineering chromosome copy number in Saccharomyces pastorianus

  Daran, J. G. (Creator), TU Delft - 4TU.ResearchData, 21 Apr 2020

  DOI: 10.4121/UUID:E5BC2CFE-D726-44A1-BC0A-D3A06653694B

  Dataset/Software: Dataset

• Dataset proteomics: Analysis of change in protein expression in Saccharomyces cerevisiae upon shift from glucose chemostat to feast/famine regime

  Verhagen, K. (Creator), Eerden, S. A. (Creator) & Wahl, S. A. (Creator), TU Delft - 4TU.ResearchData, 28 Jan 2022

  DOI: 10.4121/19008833

  Dataset/Software: Dataset

• Supplementary data to the publication: What’s wrong with SwYG? Reaching the limits of the Saccharomyces cerevisiae molecular and analytical toolbox

  Daran-Lapujade, P. A. S. (Creator), TU Delft - 4TU.ResearchData, 1 Dec 2021

  DOI: 10.4121/16539840

  Dataset/Software: Dataset

• Data underlying the study on Engineering class-B vitamin biosynthesis in Saccharomyces cerevisiae

  Daran, J. G. (Creator) & Wronska, A. K. (Creator), TU Delft - 4TU.ResearchData, 23 Dec 2022

  DOI: 10.4121/17185607

  Dataset/Software: Dataset

• Data underlying the research of Microbial synthesis of polyhydroxybutyrate in Escherichia coli: a systematic approach using thermodynamics and flux balance analysis studying different synthesis routes

  Velasco Alvarez, M. I. (Creator), Olavarria Gamez, K. (Creator), van Loosdrecht, M. C. M. (Creator), Wahl, S. A. (Creator), Sangüesa, H. (Creator) & Basalo Vázquez, S. J. (Creator), TU Delft - 4TU.ResearchData, 20 Aug 2020

  DOI: 10.4121/UUID:18EEC7DD-F927-49C3-B917-3B1E5F236786

  Dataset/Software: Dataset

• Data underlying the chromosome level genome assembly and annotation of Hanseniaspora mollemarum CBS 18055 strain

  Daran, J. G. (Creator), Bennis, N. X. (Creator) & van den Broek, M. A. (Creator), TU Delft - 4TU.ResearchData, 25 Sept 2024

  DOI: 10.4121/06bb6616-2da3-4211-8694-ff5ae37935dc

  Dataset/Software: Dataset

• Data underlying the PhD thesis: The Pulse of Metabolism: Analysing “Candidatus Accumulibacter” dynamic flows

  Páez Watson, T. W. (Creator), van Loosdrecht, M. C. M. (Creator) & Wahl, S. A. (Creator), TU Delft - 4TU.ResearchData, 3 Dec 2024

  DOI: 10.4121/802a1f66-ee9f-422d-9501-a5784b8d91dc

  Dataset/Software: Dataset

• Data underlying the publication: Respiratory reoxidation of NADH is a key contributor to high oxygen requirements of oxygen-limited cultures of Ogataea parapolymorpha

  Ortiz Merino, R. A. (Creator) & Dekker, W. J. C. (Creator), TU Delft - 4TU.ResearchData, 15 Feb 2022

  DOI: 10.4121/14270138

  Dataset/Software: Dataset

• Data underlying research on expression of heterologous molybdenum-cofactor-biosynthesis and nitrate-assimilation genes enables nitrate utilization by Saccharomyces cerevisiae

  Daran, J. G. (Creator), Perli, T. (Creator), van der Vorm, D. N. A. (Creator), Wassink, M. (Creator), van den Broek, M. A. (Creator) & Pronk, J. T. (Creator), TU Delft - 4TU.ResearchData, 2 Dec 2020

  DOI: 10.4121/13194518

  Dataset/Software: Dataset

• Dataset proteomics: Analysis of change in protein expression in Saccharomyces cerevisiae upon shift from chemostat to feast/famine regime for different sugar substrates

  Verhagen, K. (Creator), Wahl, S. A. (Creator), Pardijs, I. H. (Creator) & van Klaveren, H. M. (Creator), TU Delft - 4TU.ResearchData, 28 Feb 2023

  DOI: 10.4121/21541416

  Dataset/Software: Dataset

• Supplementary information to: Simpler is not always better: transplanting the Yarrowia lipolytica glycolytic pathway into Saccharomyces cerevisiae reveals essential synergetic regulatory mechanisms

  Knibbe, E. (Creator), Boonekamp, F. J. (Creator), Stuij, R. (Creator), Pelsma, K. A. J. (Creator), Jansen, L. (Creator), Flores Flores, C. E. (Creator) & Daran-Lapujade, P. A. S. (Creator), TU Delft - 4TU.ResearchData, 1 Mar 2022

  DOI: 10.4121/19228347

  Dataset/Software: Dataset

• Data underlying research on engineering oxygen-independent biotin biosynthesis in Saccharomyces cerevisiae

  Daran, J. G. (Creator), Wronska, A. K. (Creator) & Pronk, J. T. (Creator), TU Delft - 4TU.ResearchData, 26 Mar 2021

  DOI: 10.4121/14308007

  Dataset/Software: Dataset

• Data underlying the PhD thesis: Ecophysiology of N2O-emitting microbial communities

  Roothans, N. (Creator), Gabriëls, M. (Creator), Zandvoort, M. (Creator), van Diemen, M. L. (Creator), Herrera Mexicano, C. G. (Creator), Pabst, M. (Creator), Abeel, T. (Creator), Laureni, M. (Creator) & van Loosdrecht, M. C. M. (Creator), TU Delft - 4TU.ResearchData, 11 Nov 2024

  DOI: 10.4121/e70ef94f-95f2-4270-ad8c-b52761ed3ab2

  Dataset/Software: Dataset

• Engineering the thermotolerant industrial yeast Kluyveromyces marxianus for anaerobic growth

  Dekker, W. J. C. (Creator), Ortiz Merino, R. A. (Creator), Kaljauw, A. (Creator), Battjes, J. A. (Creator), Wiering, F. W. (Creator), Mooiman, C. (Creator), de la Torre, P. (Creator) & Pronk, J. T. (Creator), TU Delft - 4TU.ResearchData, 10 Jun 2021

  DOI: 10.4121/13265552

  Dataset/Software: Dataset

• Data underlying research on Engineering of molybdenum-cofactor-dependent nitrate assimilation in Yarrowia lipolytica

  Daran, J. G. (Creator) & Perli, T. (Creator), TU Delft - 4TU.ResearchData, 18 Mar 2021

  DOI: 10.4121/14230238

  Dataset/Software: Dataset

• Data underlying the chapter: Discovery and synthetic applications of a NAD(P)H-dependent reductive aminase from Rhodococcus erythropolis

  Jongkind, E. P. J. (Creator), Domenech, J. (Creator), Govers, A. (Creator), van den Broek, M. A. (Creator), Daran, J. G. (Creator), Grogan, G. (Creator) & Paul, C. E. (Creator), TU Delft - 4TU.ResearchData, 2 Aug 2024

  DOI: 10.4121/6fda9cb1-beb8-4985-a210-a9625eca8899

  Dataset/Software: Dataset

• Data underlying the manuscript: “Modular, synthetic chromosomes as new tools for large scale engineering of metabolism”

  Daran, J. G. (Creator) & Else-Hassing, J. (Creator), TU Delft - 4TU.ResearchData, 22 Nov 2021

  DOI: 10.4121/14979876

  Dataset/Software: Dataset