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H.P. Hofstee

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  • 2024

    Learning Structured Sparsity for Efficient Nanopore DNA Basecalling Using Delayed Masking

    Frensel, M., Al-Ars, Z. & Peter Hofstee, H., 2024, BCB '24: Proceedings of the 15th ACM International Conference on Bioinformatics, Computational Biology and Health Informatics. New York: ACM, 9 p. 12

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    12 Downloads (Pure)
  • 2023

    Tydi-Chisel: Collaborative and Interface-Driven Data-Streaming Accelerators

    Cromjongh, C., Tian, Y., Hofstee, P. & Al-Ars, Z., 2023, Proceedings of the 2023 IEEE Nordic Circuits and Systems Conference (NorCAS). IEEE, 7 p.

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    33 Downloads (Pure)
  • 2022

    Benchmarking Apache Arrow Flight - A wire-speed protocol for data transfer, querying and microservices

    Ahmad, T., Al-Ars, Z. & Hofstee, H. P., 2022, Proceedings of the 4th Benchmarking in the Datacenter: Expanding to the Cloud 2022. New York: ACM, 10 p. 1

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    1 Citation (Scopus)
    947 Downloads (Pure)

  • Communication-Efficient Cluster Scalable Genomics Data Processing Using Apache Arrow Flight

    Ahmad, T., Ma, C., Al-Ars, Z. & Hofstee, H. P., 2022, Proceedings of the 2022 21st International Symposium on Parallel and Distributed Computing (ISPDC). Gurrola, J. (ed.). Piscataway: IEEE, p. 138-146 9 p.

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

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    55 Downloads (Pure)

  • SALoBa: Maximizing Data Locality and Workload Balance for Fast Sequence Alignment on GPUs

    Park, S., Kim, H., Ahmad, T., Ahmed, N., Al-Ars, Z., Hofstee, P., Kim, Y. & Lee, J., 2022, Proceedings of the 2022 IEEE International Parallel and Distributed Processing Symposium (IPDPS). O'Conner, L. (ed.). Piscataway: IEEE, p. 728-738 11 p. 9820739

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    2 Citations (Scopus)
    46 Downloads (Pure)
  • 2021

    An Attention Module for Convolutional Neural Networks

    Zhu, B., Hofstee, P., Lee, J. & Al-Ars, Z., 2021, Artificial Neural Networks and Machine Learning – ICANN 2021 - 30th International Conference on Artificial Neural Networks, Proceedings. Farkaš, I., Masulli, P., Otte, S. & Wermter, S. (eds.). Springer, Vol. 12891. p. 167-178 12 p. (Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics); vol. 12891 LNCS).

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    9 Citations (Scopus)
    226 Downloads (Pure)

  • Battling the CPU Bottleneck in Apache Parquet to Arrow Conversion Using FPGA

    Peltenburg, J., Van Leeuwen, L. T. J., Hoozemans, J., Fang, J., Al-Ars, Z. & Hofstee, H. P., 2021, 2020 International Conference on Field-Programmable Technology (ICFPT). Maui, Hawaii, USA: IEEE, p. 281-286 6 p. 9415570

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    6 Citations (Scopus)
    318 Downloads (Pure)
  • 2020

    NASB: Neural Architecture Search for Binary Convolutional Neural Networks

    Zhu, B., Al-Ars, Z. & Hofstee, H. P., 2020, 2020 International Joint Conference on Neural Networks, IJCNN 2020 - Proceedings. Piscataway: IEEE, p. 1-8 8 p. 9207674. (Proceedings of the International Joint Conference on Neural Networks).

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    19 Citations (Scopus)
    75 Downloads (Pure)
  • 2019

    A Fine-Grained Parallel Snappy Decompressor for FPGAs Using a Relaxed Execution Model

    Fang, J., Chen, J., Lee, J., Al-Ars, Z. & Hofstee, P., 2019, 2019 IEEE 27th Annual International Symposium on Field-Programmable Custom Computing Machines (FCCM): Proceedings. IEEE, p. 335-335 1 p. 8735518

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    6 Citations (Scopus)

  • An Accelerator for Posit Arithmetic Targeting Posit Level 1 BLAS Routines and Pair-HMM

    van Dam, L., Peltenburg, J., Al-Ars, Z. & Hofstee, H. P., 2019, CoNGA'19 Proceedings of the Conference for Next Generation Arithmetic 2019. New York, NY: ACM, p. 5:1--5:10 10 p. 5

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    3 Citations (Scopus)
    231 Downloads (Pure)

  • Fletcher: A framework to efficiently integrate FPGA accelerators with apache arrow

    Peltenburg, J. W., Van Straten, J., Wijtemans, L., Van Leeuwen, L., Al-Ars, Z. & Hofstee, P., 1 Sept 2019, Proceedings - 29th International Conference on Field-Programmable Logic and Applications, FPL 2019. Sourdis, I., Bouganis, C-S., Alvarez, C., Toledo Diaz, L. A., Valero, P. & Martorell, X. (eds.). IEEE, p. 270-277 8 p. 8892145. (Proceedings - 29th International Conference on Field-Programmable Logic and Applications, FPL 2019).

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    16 Citations (Scopus)
    334 Downloads (Pure)

  • Refine and recycle: A method to increase decompression parallelism

    Fang, J., Chen, J., Lee, J., Al-Ars, Z. & Hofstee, H. P., 2019, 2019 IEEE 30th International Conference on Application-specific Systems, Architectures and Processors (ASAP): Proceedings. IEEE, p. 272-280 9 p. 8825015. (2019 IEEE 30TH INTERNATIONAL CONFERENCE ON APPLICATION-SPECIFIC SYSTEMS, ARCHITECTURES AND PROCESSORS (ASAP 2019)).

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    6 Citations (Scopus)

  • Supporting Columnar In-memory Formats on FPGA: The Hardware Design of Fletcher for Apache Arrow

    Peltenburg, J., van Straten, J., Brobbel, M., Hofstee, H. P. & Al-Ars, Z., 2019, Applied Reconfigurable Computing: 15th International Symposium, ARC 2019, Proceedings. Hochberger, C., Koch, A., Diniz, P., Woods, R. & Nelson, B. (eds.). Cham: Springer, p. 32-47 16 p. (Lecture Notes in Computer Science; vol. 11444 LNCS).

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    13 Citations (Scopus)
    226 Downloads (Pure)
  • 2018

    A High-Bandwidth Snappy Decompressor in Reconfigurable Logic

    Fang, J., Chen, J., Al-Ars, Z., Hofstee, P. & Hidders, J., 30 Sept 2018, 2018 International Conference on Hardware/Software Codesign and System Synthesis (CODES+ ISSS). IEEE, p. 1-2 2 p.

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    184 Downloads (Pure)

  • A matrix-multiply unit for posits in reconfigurable logic leveraging (Open)CAPI

    Chen, J., Al-Ars, Z. & Hofstee, H. P., 2018, Proceedings of the Conference for Next Generation Arithmetic, CoNGA 2018. ACM, p. 1-5 5 p. 1

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    Open Access
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    8 Citations (Scopus)
    70 Downloads (Pure)

  • CAPI-Flash Accelerated Persistent Read Cache for Apache Cassandra

    Sendir, B., Govindaraju, M., Odaira, R. & Hofstee, P., 2018, 2018 IEEE 11th International Conference on Cloud Computing (CLOUD). Bilof, R. (ed.). Piscataway: IEEE, p. 220-228 9 p.

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    5 Citations (Scopus)
  • 2017

    SparkGA: A Spark Framework for Cost Effective, Fast and Accurate DNA Analysis at Scale

    Mushtaq, H., Liu, F., Costa, C., Liu, G., Hofstee, P. & Al-Ars, Z., 2017, ACM-BCB '17 Proceedings of the 8th ACM International Conference on Bioinformatics, Computational Biology,and Health Informatics . New York: ACM, p. 148-157 10 p.

    Research output: Chapter in Book/Conference proceedings/Edited volume › Conference contribution › Scientific › peer-review

    25 Citations (Scopus)