TY - GEN
T1 - Employing Visual Analytics to Aid the Design of White Matter Hyperintensity Classifiers
AU - Raidou, Renata Georgia
AU - Kuijf, Hugo J.
AU - Sepasian, Neda
AU - Pezzotti, Nicola
AU - Bouvy, Willem H.
AU - Breeuwer, Marcel J.
AU - Vilanova Bartroli, Anna
PY - 2016
Y1 - 2016
N2 - Accurate segmentation of brain white matter hyperintensities (WMHs) is important for prognosis and disease monitoring. To this end, classifiers are often trained – usually, using T1 and FLAIR weighted MR images. Incorporating additional features, derived from diffusion weighted MRI, could improve classification. However, the multitude of diffusion-derived features requires selecting the most adequate. For this, automated feature selection is commonly employed, which can often be sub-optimal. In this work, we propose a different approach, introducing a semi-automated pipeline to select interactively features for WMH classification. The advantage of this solution is the integration of the knowledge and skills of experts in the process. In our pipeline, a Visual Analytics (VA) system is employed, to enable user-driven feature selection. The resulting features are T1, FLAIR, Mean Diffusivity (MD), and Radial Diffusivity (RD) – and secondarily, C S CS
and Fractional Anisotropy (FA). The next step in the pipeline is to train a classifier with these features, and compare its results to a similar classifier, used in previous work with automated feature selection. Finally, VA is employed again, to analyze and understand the classifier performance and results.
AB - Accurate segmentation of brain white matter hyperintensities (WMHs) is important for prognosis and disease monitoring. To this end, classifiers are often trained – usually, using T1 and FLAIR weighted MR images. Incorporating additional features, derived from diffusion weighted MRI, could improve classification. However, the multitude of diffusion-derived features requires selecting the most adequate. For this, automated feature selection is commonly employed, which can often be sub-optimal. In this work, we propose a different approach, introducing a semi-automated pipeline to select interactively features for WMH classification. The advantage of this solution is the integration of the knowledge and skills of experts in the process. In our pipeline, a Visual Analytics (VA) system is employed, to enable user-driven feature selection. The resulting features are T1, FLAIR, Mean Diffusivity (MD), and Radial Diffusivity (RD) – and secondarily, C S CS
and Fractional Anisotropy (FA). The next step in the pipeline is to train a classifier with these features, and compare its results to a similar classifier, used in previous work with automated feature selection. Finally, VA is employed again, to analyze and understand the classifier performance and results.
KW - White matter hyperintensities (WMHs)
KW - Visual Analytics (VA)
KW - Classification
KW - Interactive feature selection
U2 - 10.1007/978-3-319-46723-8_12
DO - 10.1007/978-3-319-46723-8_12
M3 - Conference contribution
SN - 978-3-319-46722-1
T3 - Lecture Notes in Computer Science
SP - 97
EP - 105
BT - Medical Image Computing and Computer-Assisted Intervention - MICCAI 2016: 19th International Conference, Proceedings
A2 - Ourselin, Sebastien
A2 - Joskowicz, Leo
A2 - Sabuncu, Mert R.
A2 - Unal, Gozde
A2 - Wells, William
PB - Springer
CY - Cham
T2 - MICCAI 2016 - Medical Image Computing and Computer-Assisted Intervention
Y2 - 16 October 2016 through 21 October 2016
ER -