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Research Output

ArrowSAM: In-Memory Genomics Data Processing Using Apache Arrow

Ahmad, T., Ahmed, N., Peltenburg, J. & Al-Ars, Z., 2020, 2020 3rd International Conference on Computer Applications & Information Security (ICCAIS): Proceedings. IEEE, p. 1-6 6 p. 9096725

Research output: Chapter in Book/Conference proceedings/Edited volumeConference contributionScientificpeer-review

Open Access
File
  • 9 Downloads (Pure)

    Efficient GPU Acceleration for Computing Maximal Exact Matches in Long DNA Reads

    Ahmed, N., Bertels, K. & Al-Ars, Z., 2020, ICBBB 2020 : Proceedings of 2020 10th International Conference on Bioscience, Biochemistry and Bioinformatics. New York: Association for Computing Machinery (ACM), p. 28-34 7 p.

    Research output: Chapter in Book/Conference proceedings/Edited volumeConference contributionScientificpeer-review

    Open Access
    File
  • 3 Downloads (Pure)

    GPU acceleration of Darwin read overlapper for de novo assembly of long DNA reads

    Ahmed, N., Qiu, T. D., Bertels, K. & Al-Ars, Z., 2020, In : BMC Bioinformatics. 21, p. 1-17 17 p., 388.

    Research output: Contribution to journalArticleScientificpeer-review

    Open Access
    File
  • 1 Downloads (Pure)

    High Performance Seed-and-Extend Algorithms for Genomics

    Ahmed, N., 2020, 119 p.

    Research output: ThesisDissertation (TU Delft)

    Open Access
    File
  • 99 Downloads (Pure)

    Diminished-1 Fermat Number Transform for Integer Convolutional Neural Networks

    Baozhou, Z., Ahmed, N., Peltenburg, J., Bertels, K. & Al-Ars, Z., 2019, 2019 IEEE 4th International Conference on Big Data Analytics (ICBDA). Guan, S-U., Zhang, K. & Cao, J. (eds.). Piscataway, NJ, USA: IEEE, p. 47-52 6 p. 8713250

    Research output: Chapter in Book/Conference proceedings/Edited volumeConference contributionScientificpeer-review